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The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError
Exception: DatasetGenerationCastError
Message: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 8 new columns ({'SSIM', 'Trachea_removed', 'Dice', 'Faces_full', 'IoU', 'PSNR(dB)', 'Recall', 'Precision'}) and 8 missing columns ({'MSD_compression(mm)', 'Faces', 'HD95_compression(mm)', 'HD95_vs_GT(mm)', 'Size(MB)', 'QEM_time(s)', 'Target', 'MSD_vs_GT(mm)'}).
This happened while the csv dataset builder was generating data using
hf://datasets/Yousra0x0/reconstruction_unetv2_val20/table2_main_metrics.csv (at revision 2baa18b6d6254f780c2dca19ea3a2256f7c098a9), [/tmp/hf-datasets-cache/medium/datasets/72583189270544-config-parquet-and-info-Yousra0x0-reconstruction_-ee472841/hub/datasets--Yousra0x0--reconstruction_unetv2_val20/snapshots/2baa18b6d6254f780c2dca19ea3a2256f7c098a9/table1_qem_metrics.csv (origin=hf://datasets/Yousra0x0/reconstruction_unetv2_val20@2baa18b6d6254f780c2dca19ea3a2256f7c098a9/table1_qem_metrics.csv), /tmp/hf-datasets-cache/medium/datasets/72583189270544-config-parquet-and-info-Yousra0x0-reconstruction_-ee472841/hub/datasets--Yousra0x0--reconstruction_unetv2_val20/snapshots/2baa18b6d6254f780c2dca19ea3a2256f7c098a9/table2_main_metrics.csv (origin=hf://datasets/Yousra0x0/reconstruction_unetv2_val20@2baa18b6d6254f780c2dca19ea3a2256f7c098a9/table2_main_metrics.csv)]
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback: Traceback (most recent call last):
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1800, in _prepare_split_single
writer.write_table(table)
File "/usr/local/lib/python3.12/site-packages/datasets/arrow_writer.py", line 765, in write_table
self._write_table(pa_table, writer_batch_size=writer_batch_size)
File "/usr/local/lib/python3.12/site-packages/datasets/arrow_writer.py", line 773, in _write_table
pa_table = table_cast(pa_table, self._schema)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2321, in table_cast
return cast_table_to_schema(table, schema)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/table.py", line 2249, in cast_table_to_schema
raise CastError(
datasets.table.CastError: Couldn't cast
Patient: string
Dice: double
IoU: double
Precision: double
Recall: double
PSNR(dB): double
SSIM: double
Faces_full: int64
Watertight: bool
Volume(mm³): int64
Trachea_removed: int64
-- schema metadata --
pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 1535
to
{'Patient': Value('string'), 'Target': Value('string'), 'Faces': Value('int64'), 'HD95_compression(mm)': Value('float64'), 'MSD_compression(mm)': Value('float64'), 'HD95_vs_GT(mm)': Value('float64'), 'MSD_vs_GT(mm)': Value('float64'), 'Volume(mm³)': Value('int64'), 'Size(MB)': Value('float64'), 'Watertight': Value('bool'), 'QEM_time(s)': Value('float64')}
because column names don't match
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1347, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 980, in convert_to_parquet
builder.download_and_prepare(
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 882, in download_and_prepare
self._download_and_prepare(
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 943, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1646, in _prepare_split
for job_id, done, content in self._prepare_split_single(
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.12/site-packages/datasets/builder.py", line 1802, in _prepare_split_single
raise DatasetGenerationCastError.from_cast_error(
datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 8 new columns ({'SSIM', 'Trachea_removed', 'Dice', 'Faces_full', 'IoU', 'PSNR(dB)', 'Recall', 'Precision'}) and 8 missing columns ({'MSD_compression(mm)', 'Faces', 'HD95_compression(mm)', 'HD95_vs_GT(mm)', 'Size(MB)', 'QEM_time(s)', 'Target', 'MSD_vs_GT(mm)'}).
This happened while the csv dataset builder was generating data using
hf://datasets/Yousra0x0/reconstruction_unetv2_val20/table2_main_metrics.csv (at revision 2baa18b6d6254f780c2dca19ea3a2256f7c098a9), [/tmp/hf-datasets-cache/medium/datasets/72583189270544-config-parquet-and-info-Yousra0x0-reconstruction_-ee472841/hub/datasets--Yousra0x0--reconstruction_unetv2_val20/snapshots/2baa18b6d6254f780c2dca19ea3a2256f7c098a9/table1_qem_metrics.csv (origin=hf://datasets/Yousra0x0/reconstruction_unetv2_val20@2baa18b6d6254f780c2dca19ea3a2256f7c098a9/table1_qem_metrics.csv), /tmp/hf-datasets-cache/medium/datasets/72583189270544-config-parquet-and-info-Yousra0x0-reconstruction_-ee472841/hub/datasets--Yousra0x0--reconstruction_unetv2_val20/snapshots/2baa18b6d6254f780c2dca19ea3a2256f7c098a9/table2_main_metrics.csv (origin=hf://datasets/Yousra0x0/reconstruction_unetv2_val20@2baa18b6d6254f780c2dca19ea3a2256f7c098a9/table2_main_metrics.csv)]
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
Patient string | Target string | Faces int64 | HD95_compression(mm) float64 | MSD_compression(mm) float64 | HD95_vs_GT(mm) float64 | MSD_vs_GT(mm) float64 | Volume(mm³) int64 | Size(MB) float64 | Watertight bool | QEM_time(s) float64 |
|---|---|---|---|---|---|---|---|---|---|---|
coronacases_006 | 50k | 50,000 | 1.872 | 0.945 | 9.404 | 2.26 | 442,249 | 1.7 | false | 1.8 |
coronacases_006 | 100k | 100,000 | 1.874 | 0.951 | 9.404 | 2.26 | 442,315 | 3.4 | false | 1.1 |
coronacases_006 | 200k | 111,326 | 1.856 | 0.948 | 9.404 | 2.26 | 442,317 | 3.8 | false | 0 |
coronacases_008 | 50k | 49,999 | 1.834 | 0.926 | 12.409 | 2.405 | 452,847 | 1.7 | false | 0.6 |
coronacases_008 | 100k | 99,999 | 1.799 | 0.911 | 12.409 | 2.405 | 452,993 | 3.4 | false | 0.4 |
coronacases_008 | 200k | 102,154 | 1.805 | 0.91 | 12.409 | 2.405 | 452,993 | 3.5 | false | 0 |
radiopaedia_10_85902_3 | 50k | 49,999 | 1.927 | 0.969 | 9.71 | 2.227 | 526,796 | 1.7 | false | 0.6 |
radiopaedia_10_85902_3 | 100k | 100,000 | 1.897 | 0.966 | 9.71 | 2.227 | 526,995 | 3.4 | false | 0.4 |
radiopaedia_10_85902_3 | 200k | 112,782 | 1.884 | 0.966 | 9.71 | 2.227 | 526,996 | 3.9 | false | 0 |
radiopaedia_27_86410_0 | 50k | 50,000 | 1.587 | 0.807 | 11.112 | 2.396 | 177,370 | 1.7 | true | 0.4 |
radiopaedia_27_86410_0 | 100k | 81,020 | 1.58 | 0.803 | 11.112 | 2.396 | 177,386 | 2.8 | true | 0 |
radiopaedia_27_86410_0 | 200k | 81,020 | 1.587 | 0.805 | 11.112 | 2.396 | 177,386 | 2.8 | true | 0 |
coronacases_006 | null | null | null | null | null | null | 442,317 | null | false | null |
coronacases_008 | null | null | null | null | null | null | 452,993 | null | false | null |
radiopaedia_10_85902_3 | null | null | null | null | null | null | 526,996 | null | false | null |
radiopaedia_27_86410_0 | null | null | null | null | null | null | 177,386 | null | true | null |
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