Commit
·
642907a
1
Parent(s):
18386c7
initial server
Browse files- README.md +87 -5
- __pycache__/app.cpython-311.pyc +0 -0
- app.py +367 -0
- requirements.txt +2 -0
README.md
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@@ -1,12 +1,94 @@
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---
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title: Research Tracker
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emoji:
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colorFrom:
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colorTo:
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sdk: gradio
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sdk_version: 5.38.2
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app_file: app.py
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pinned: false
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---
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-
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---
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title: Research Tracker MCP
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emoji: 🔬
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colorFrom: blue
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colorTo: purple
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sdk: gradio
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sdk_version: 5.38.2
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app_file: app.py
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pinned: false
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license: mit
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---
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# Research Tracker MCP Server
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A Gradio-based MCP (Model Context Protocol) server that provides research inference utilities for AI assistants and tools. This server offers public-facing APIs to extract and infer research metadata from various sources like papers, repositories, and project pages.
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## Features
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### MCP Tools Available
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- **`infer_authors`**: Extract author names from research papers, repositories, or project URLs
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- **`infer_paper_url`**: Find associated research papers from GitHub repos, project pages, or partial information
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- **`infer_code_repository`**: Locate code repositories from paper URLs or project information
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- **`infer_research_name`**: Extract formal paper/project titles from various inputs
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- **`classify_research_url`**: Classify URLs as Paper, Code, Model, Dataset, Space, or Project
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### Supported Input Types
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- **arXiv papers**: `https://arxiv.org/abs/2010.11929`
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- **GitHub repositories**: `https://github.com/google-research/vision_transformer`
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- **Hugging Face resources**: Models, Datasets, Spaces, Papers
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- **Project pages**: GitHub Pages, personal websites
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- **Research titles**: Natural language paper titles
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## Usage
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### As MCP Server
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This space can be used as an MCP server by AI assistants that support the MCP protocol. Configure your MCP client with:
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```json
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{
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"mcpServers": {
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"research-tracker": {
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"url": "https://YOUR_SPACE_NAME.hf.space/gradio_api/mcp/sse"
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}
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}
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}
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```
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### Web Interface
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The space also provides a web interface for testing the inference functions directly in your browser.
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## Architecture
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This MCP server delegates all inference logic to the [Research Tracker Backend](https://huggingface.co/spaces/dylanebert/research-tracker-backend) to ensure consistency and avoid code duplication. It serves as a public-facing interface for research inference utilities without requiring database access.
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## Examples
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### Infer Authors from arXiv Paper
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```python
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infer_authors("https://arxiv.org/abs/2010.11929")
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# Returns: ["Alexey Dosovitskiy", "Lucas Beyer", "Alexander Kolesnikov", ...]
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```
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### Find Paper from GitHub Repository
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```python
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infer_paper_url("https://github.com/google-research/vision_transformer")
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# Returns: "https://arxiv.org/abs/2010.11929"
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```
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### Classify URL Type
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```python
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classify_research_url("https://huggingface.co/google/vit-base-patch16-224")
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# Returns: "Model"
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```
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## Requirements
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- Python 3.11+
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- Gradio with MCP support
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- Internet connection for backend API calls
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## Development
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The server is built with:
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- **Gradio**: Web interface and MCP protocol support
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- **Requests**: HTTP client for backend communication
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- **Backend Integration**: Calls to research-tracker-backend API
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## License
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MIT License - Feel free to use and modify for your research needs.
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__pycache__/app.cpython-311.pyc
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app.py
ADDED
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"""
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Research Tracker MCP Server
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| 3 |
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A Gradio-based MCP server that provides research inference utilities.
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| 5 |
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Delegates inference logic to the research-tracker-backend for consistency.
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"""
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import os
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import requests
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import gradio as gr
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from typing import List, Dict, Any, Optional
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import logging
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# Configure logging
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| 15 |
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logging.basicConfig(level=logging.INFO)
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logger = logging.getLogger(__name__)
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# Configuration
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BACKEND_URL = "https://dylanebert-research-tracker-backend.hf.space"
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HF_TOKEN = os.environ.get("HF_TOKEN")
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REQUEST_TIMEOUT = 30
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if not HF_TOKEN:
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logger.warning("HF_TOKEN not found in environment variables")
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| 25 |
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| 26 |
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def make_backend_request(endpoint: str, data: Dict[str, Any]) -> Dict[str, Any]:
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| 28 |
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"""
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Make a request to the research-tracker-backend.
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| 30 |
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Args:
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| 32 |
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endpoint: The backend endpoint to call (e.g., 'infer-authors')
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| 33 |
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data: The data to send in the request body
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| 34 |
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| 35 |
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Returns:
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| 36 |
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The response data from the backend
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| 37 |
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| 38 |
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Raises:
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| 39 |
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Exception: If the request fails or returns an error
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"""
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url = f"{BACKEND_URL}/{endpoint}"
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headers = {
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"Content-Type": "application/json",
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"Authorization": f"Bearer {HF_TOKEN}" if HF_TOKEN else ""
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}
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| 47 |
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try:
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| 48 |
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response = requests.post(url, json=data, headers=headers, timeout=REQUEST_TIMEOUT)
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| 49 |
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response.raise_for_status()
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| 50 |
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return response.json()
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| 51 |
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except requests.exceptions.Timeout:
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| 52 |
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raise Exception(f"Request to {endpoint} timed out")
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| 53 |
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except requests.exceptions.RequestException as e:
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| 54 |
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raise Exception(f"Request to {endpoint} failed: {str(e)}")
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| 57 |
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def infer_authors(input_data: str) -> List[str]:
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| 58 |
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"""
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Infer authors from research paper or project information.
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| 60 |
+
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| 61 |
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This function attempts to extract author names from various inputs like
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| 62 |
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paper URLs (arXiv, Hugging Face papers), project pages, or repository links.
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| 63 |
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It uses the research-tracker-backend inference engine.
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| 64 |
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| 65 |
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Args:
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| 66 |
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input_data: A URL, paper title, or other research-related input
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| 67 |
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Returns:
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| 69 |
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A list of author names, or empty list if no authors found
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| 70 |
+
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| 71 |
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Examples:
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| 72 |
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>>> infer_authors("https://arxiv.org/abs/2103.00020")
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| 73 |
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["Alexey Dosovitskiy", "Lucas Beyer", "Alexander Kolesnikov", ...]
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| 74 |
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>>> infer_authors("https://github.com/google-research/vision_transformer")
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| 76 |
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["Alexey Dosovitskiy", "Lucas Beyer", ...]
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"""
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| 78 |
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if not input_data or not input_data.strip():
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| 79 |
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return []
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| 80 |
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| 81 |
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try:
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| 82 |
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# Create a minimal row data structure for the backend
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| 83 |
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row_data = {
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| 84 |
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"Name": None,
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| 85 |
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"Authors": [],
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| 86 |
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"Paper": input_data if "arxiv" in input_data or "huggingface.co/papers" in input_data else None,
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| 87 |
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"Code": input_data if "github.com" in input_data else None,
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| 88 |
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"Project": input_data if "github.io" in input_data else None,
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| 89 |
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"Space": input_data if "huggingface.co/spaces" in input_data else None,
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| 90 |
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"Model": input_data if "huggingface.co/models" in input_data else None,
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| 91 |
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"Dataset": input_data if "huggingface.co/datasets" in input_data else None,
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| 92 |
+
}
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| 93 |
+
|
| 94 |
+
# If we can't classify the input, try it as a paper
|
| 95 |
+
if not any(row_data.values()):
|
| 96 |
+
row_data["Paper"] = input_data
|
| 97 |
+
|
| 98 |
+
# Call the backend
|
| 99 |
+
result = make_backend_request("infer-authors", row_data)
|
| 100 |
+
|
| 101 |
+
# Extract authors from response
|
| 102 |
+
authors = result.get("authors", [])
|
| 103 |
+
if isinstance(authors, str):
|
| 104 |
+
# Handle comma-separated string format
|
| 105 |
+
authors = [author.strip() for author in authors.split(",") if author.strip()]
|
| 106 |
+
elif not isinstance(authors, list):
|
| 107 |
+
authors = []
|
| 108 |
+
|
| 109 |
+
return authors
|
| 110 |
+
|
| 111 |
+
except Exception as e:
|
| 112 |
+
logger.error(f"Error inferring authors: {e}")
|
| 113 |
+
return []
|
| 114 |
+
|
| 115 |
+
|
| 116 |
+
def infer_paper_url(input_data: str) -> str:
|
| 117 |
+
"""
|
| 118 |
+
Infer the paper URL from various research-related inputs.
|
| 119 |
+
|
| 120 |
+
This function attempts to find the associated research paper from
|
| 121 |
+
inputs like GitHub repositories, project pages, or partial URLs.
|
| 122 |
+
|
| 123 |
+
Args:
|
| 124 |
+
input_data: A URL, repository link, or other research-related input
|
| 125 |
+
|
| 126 |
+
Returns:
|
| 127 |
+
The paper URL (typically arXiv or Hugging Face papers), or empty string if not found
|
| 128 |
+
|
| 129 |
+
Examples:
|
| 130 |
+
>>> infer_paper_url("https://github.com/google-research/vision_transformer")
|
| 131 |
+
"https://arxiv.org/abs/2010.11929"
|
| 132 |
+
|
| 133 |
+
>>> infer_paper_url("Vision Transformer")
|
| 134 |
+
"https://arxiv.org/abs/2010.11929"
|
| 135 |
+
"""
|
| 136 |
+
if not input_data or not input_data.strip():
|
| 137 |
+
return ""
|
| 138 |
+
|
| 139 |
+
try:
|
| 140 |
+
# Create row data structure
|
| 141 |
+
row_data = {
|
| 142 |
+
"Name": input_data if not input_data.startswith("http") else None,
|
| 143 |
+
"Authors": [],
|
| 144 |
+
"Paper": input_data if "arxiv" in input_data or "huggingface.co/papers" in input_data else None,
|
| 145 |
+
"Code": input_data if "github.com" in input_data else None,
|
| 146 |
+
"Project": input_data if "github.io" in input_data else None,
|
| 147 |
+
"Space": input_data if "huggingface.co/spaces" in input_data else None,
|
| 148 |
+
"Model": input_data if "huggingface.co/models" in input_data else None,
|
| 149 |
+
"Dataset": input_data if "huggingface.co/datasets" in input_data else None,
|
| 150 |
+
}
|
| 151 |
+
|
| 152 |
+
# Call the backend
|
| 153 |
+
result = make_backend_request("infer-paper", row_data)
|
| 154 |
+
|
| 155 |
+
# Extract paper URL from response
|
| 156 |
+
paper_url = result.get("paper", "")
|
| 157 |
+
return paper_url if paper_url else ""
|
| 158 |
+
|
| 159 |
+
except Exception as e:
|
| 160 |
+
logger.error(f"Error inferring paper: {e}")
|
| 161 |
+
return ""
|
| 162 |
+
|
| 163 |
+
|
| 164 |
+
def infer_code_repository(input_data: str) -> str:
|
| 165 |
+
"""
|
| 166 |
+
Infer the code repository URL from research-related inputs.
|
| 167 |
+
|
| 168 |
+
This function attempts to find the associated code repository from
|
| 169 |
+
inputs like paper URLs, project pages, or partial information.
|
| 170 |
+
|
| 171 |
+
Args:
|
| 172 |
+
input_data: A URL, paper link, or other research-related input
|
| 173 |
+
|
| 174 |
+
Returns:
|
| 175 |
+
The code repository URL (typically GitHub), or empty string if not found
|
| 176 |
+
|
| 177 |
+
Examples:
|
| 178 |
+
>>> infer_code_repository("https://arxiv.org/abs/2010.11929")
|
| 179 |
+
"https://github.com/google-research/vision_transformer"
|
| 180 |
+
|
| 181 |
+
>>> infer_code_repository("Vision Transformer")
|
| 182 |
+
"https://github.com/google-research/vision_transformer"
|
| 183 |
+
"""
|
| 184 |
+
if not input_data or not input_data.strip():
|
| 185 |
+
return ""
|
| 186 |
+
|
| 187 |
+
try:
|
| 188 |
+
# Create row data structure
|
| 189 |
+
row_data = {
|
| 190 |
+
"Name": input_data if not input_data.startswith("http") else None,
|
| 191 |
+
"Authors": [],
|
| 192 |
+
"Paper": input_data if "arxiv" in input_data or "huggingface.co/papers" in input_data else None,
|
| 193 |
+
"Code": input_data if "github.com" in input_data else None,
|
| 194 |
+
"Project": input_data if "github.io" in input_data else None,
|
| 195 |
+
"Space": input_data if "huggingface.co/spaces" in input_data else None,
|
| 196 |
+
"Model": input_data if "huggingface.co/models" in input_data else None,
|
| 197 |
+
"Dataset": input_data if "huggingface.co/datasets" in input_data else None,
|
| 198 |
+
}
|
| 199 |
+
|
| 200 |
+
# Call the backend
|
| 201 |
+
result = make_backend_request("infer-code", row_data)
|
| 202 |
+
|
| 203 |
+
# Extract code URL from response
|
| 204 |
+
code_url = result.get("code", "")
|
| 205 |
+
return code_url if code_url else ""
|
| 206 |
+
|
| 207 |
+
except Exception as e:
|
| 208 |
+
logger.error(f"Error inferring code: {e}")
|
| 209 |
+
return ""
|
| 210 |
+
|
| 211 |
+
|
| 212 |
+
def infer_research_name(input_data: str) -> str:
|
| 213 |
+
"""
|
| 214 |
+
Infer the research paper or project name from various inputs.
|
| 215 |
+
|
| 216 |
+
This function attempts to extract the formal name/title of a research
|
| 217 |
+
paper or project from URLs, repositories, or partial information.
|
| 218 |
+
|
| 219 |
+
Args:
|
| 220 |
+
input_data: A URL, repository link, or other research-related input
|
| 221 |
+
|
| 222 |
+
Returns:
|
| 223 |
+
The research name/title, or empty string if not found
|
| 224 |
+
|
| 225 |
+
Examples:
|
| 226 |
+
>>> infer_research_name("https://arxiv.org/abs/2010.11929")
|
| 227 |
+
"An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale"
|
| 228 |
+
|
| 229 |
+
>>> infer_research_name("https://github.com/google-research/vision_transformer")
|
| 230 |
+
"Vision Transformer"
|
| 231 |
+
"""
|
| 232 |
+
if not input_data or not input_data.strip():
|
| 233 |
+
return ""
|
| 234 |
+
|
| 235 |
+
try:
|
| 236 |
+
# Create row data structure
|
| 237 |
+
row_data = {
|
| 238 |
+
"Name": None,
|
| 239 |
+
"Authors": [],
|
| 240 |
+
"Paper": input_data if "arxiv" in input_data or "huggingface.co/papers" in input_data else None,
|
| 241 |
+
"Code": input_data if "github.com" in input_data else None,
|
| 242 |
+
"Project": input_data if "github.io" in input_data else None,
|
| 243 |
+
"Space": input_data if "huggingface.co/spaces" in input_data else None,
|
| 244 |
+
"Model": input_data if "huggingface.co/models" in input_data else None,
|
| 245 |
+
"Dataset": input_data if "huggingface.co/datasets" in input_data else None,
|
| 246 |
+
}
|
| 247 |
+
|
| 248 |
+
# Call the backend
|
| 249 |
+
result = make_backend_request("infer-name", row_data)
|
| 250 |
+
|
| 251 |
+
# Extract name from response
|
| 252 |
+
name = result.get("name", "")
|
| 253 |
+
return name if name else ""
|
| 254 |
+
|
| 255 |
+
except Exception as e:
|
| 256 |
+
logger.error(f"Error inferring name: {e}")
|
| 257 |
+
return ""
|
| 258 |
+
|
| 259 |
+
|
| 260 |
+
def classify_research_url(url: str) -> str:
|
| 261 |
+
"""
|
| 262 |
+
Classify the type of research-related URL or input.
|
| 263 |
+
|
| 264 |
+
This function determines what type of research resource a given URL
|
| 265 |
+
or input represents (paper, code, model, dataset, etc.).
|
| 266 |
+
|
| 267 |
+
Args:
|
| 268 |
+
url: The URL or input to classify
|
| 269 |
+
|
| 270 |
+
Returns:
|
| 271 |
+
The field type: "Paper", "Code", "Space", "Model", "Dataset", "Project", or "Unknown"
|
| 272 |
+
|
| 273 |
+
Examples:
|
| 274 |
+
>>> classify_research_url("https://arxiv.org/abs/2010.11929")
|
| 275 |
+
"Paper"
|
| 276 |
+
|
| 277 |
+
>>> classify_research_url("https://github.com/google-research/vision_transformer")
|
| 278 |
+
"Code"
|
| 279 |
+
|
| 280 |
+
>>> classify_research_url("https://huggingface.co/google/vit-base-patch16-224")
|
| 281 |
+
"Model"
|
| 282 |
+
"""
|
| 283 |
+
if not url or not url.strip():
|
| 284 |
+
return "Unknown"
|
| 285 |
+
|
| 286 |
+
try:
|
| 287 |
+
# Call the backend
|
| 288 |
+
result = make_backend_request("infer-field", {"value": url})
|
| 289 |
+
|
| 290 |
+
# Extract field from response
|
| 291 |
+
field = result.get("field", "Unknown")
|
| 292 |
+
return field if field else "Unknown"
|
| 293 |
+
|
| 294 |
+
except Exception as e:
|
| 295 |
+
logger.error(f"Error classifying URL: {e}")
|
| 296 |
+
return "Unknown"
|
| 297 |
+
|
| 298 |
+
|
| 299 |
+
# Create Gradio interface
|
| 300 |
+
def create_demo():
|
| 301 |
+
"""Create the Gradio demo interface for testing."""
|
| 302 |
+
|
| 303 |
+
with gr.Blocks(title="Research Tracker MCP Server") as demo:
|
| 304 |
+
gr.Markdown("# Research Tracker MCP Server")
|
| 305 |
+
gr.Markdown("Test the research inference utilities that are available through MCP.")
|
| 306 |
+
|
| 307 |
+
with gr.Tab("Authors"):
|
| 308 |
+
with gr.Row():
|
| 309 |
+
author_input = gr.Textbox(
|
| 310 |
+
label="Input (URL, paper title, etc.)",
|
| 311 |
+
placeholder="https://arxiv.org/abs/2010.11929",
|
| 312 |
+
lines=1
|
| 313 |
+
)
|
| 314 |
+
author_output = gr.JSON(label="Authors")
|
| 315 |
+
author_btn = gr.Button("Infer Authors")
|
| 316 |
+
author_btn.click(infer_authors, inputs=author_input, outputs=author_output)
|
| 317 |
+
|
| 318 |
+
with gr.Tab("Paper"):
|
| 319 |
+
with gr.Row():
|
| 320 |
+
paper_input = gr.Textbox(
|
| 321 |
+
label="Input (GitHub repo, project name, etc.)",
|
| 322 |
+
placeholder="https://github.com/google-research/vision_transformer",
|
| 323 |
+
lines=1
|
| 324 |
+
)
|
| 325 |
+
paper_output = gr.Textbox(label="Paper URL")
|
| 326 |
+
paper_btn = gr.Button("Infer Paper")
|
| 327 |
+
paper_btn.click(infer_paper_url, inputs=paper_input, outputs=paper_output)
|
| 328 |
+
|
| 329 |
+
with gr.Tab("Code"):
|
| 330 |
+
with gr.Row():
|
| 331 |
+
code_input = gr.Textbox(
|
| 332 |
+
label="Input (paper URL, project name, etc.)",
|
| 333 |
+
placeholder="https://arxiv.org/abs/2010.11929",
|
| 334 |
+
lines=1
|
| 335 |
+
)
|
| 336 |
+
code_output = gr.Textbox(label="Code Repository URL")
|
| 337 |
+
code_btn = gr.Button("Infer Code")
|
| 338 |
+
code_btn.click(infer_code_repository, inputs=code_input, outputs=code_output)
|
| 339 |
+
|
| 340 |
+
with gr.Tab("Name"):
|
| 341 |
+
with gr.Row():
|
| 342 |
+
name_input = gr.Textbox(
|
| 343 |
+
label="Input (URL, repo, etc.)",
|
| 344 |
+
placeholder="https://github.com/google-research/vision_transformer",
|
| 345 |
+
lines=1
|
| 346 |
+
)
|
| 347 |
+
name_output = gr.Textbox(label="Research Name/Title")
|
| 348 |
+
name_btn = gr.Button("Infer Name")
|
| 349 |
+
name_btn.click(infer_research_name, inputs=name_input, outputs=name_output)
|
| 350 |
+
|
| 351 |
+
with gr.Tab("Classify"):
|
| 352 |
+
with gr.Row():
|
| 353 |
+
classify_input = gr.Textbox(
|
| 354 |
+
label="URL to classify",
|
| 355 |
+
placeholder="https://huggingface.co/google/vit-base-patch16-224",
|
| 356 |
+
lines=1
|
| 357 |
+
)
|
| 358 |
+
classify_output = gr.Textbox(label="URL Type")
|
| 359 |
+
classify_btn = gr.Button("Classify URL")
|
| 360 |
+
classify_btn.click(classify_research_url, inputs=classify_input, outputs=classify_output)
|
| 361 |
+
|
| 362 |
+
return demo
|
| 363 |
+
|
| 364 |
+
|
| 365 |
+
if __name__ == "__main__":
|
| 366 |
+
demo = create_demo()
|
| 367 |
+
demo.launch(mcp_server=True, share=False)
|
requirements.txt
ADDED
|
@@ -0,0 +1,2 @@
|
|
|
|
|
|
|
|
|
|
| 1 |
+
gradio[mcp]==5.38.2
|
| 2 |
+
requests==2.32.4
|