# Medical AI Platform - Public Model Configuration ## Overview This Medical AI Platform is designed to work **WITHOUT requiring HuggingFace authentication** for most use cases. All core medical AI models used are **public and freely available**. --- ## Model Access Strategy ### Public Models (No Authentication Required) The following models are public on HuggingFace and work without HF_TOKEN: 1. **Bio_ClinicalBERT** (`emilyalsentzer/Bio_ClinicalBERT`) - Document type classification - Clinical text understanding - **Public** - No auth needed 2. **BioGPT-Large** (`microsoft/BioGPT-Large`) - Clinical text generation - Medical summarization - **Public** - No auth needed 3. **Biomedical NER** (`d4data/biomedical-ner-all`) - Named entity recognition - Medical entity extraction - **Public** - No auth needed 4. **PubMedBERT** (`microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext`) - Medical text understanding - General analysis - **Public** - No auth needed 5. **SciBERT** (`allenai/scibert_scivocab_uncased`) - Drug interaction detection - Scientific text analysis - **Public** - No auth needed 6. **RoBERTa-SQuAD2** (`deepset/roberta-base-squad2`) - Medical question answering - **Public** - No auth needed 7. **BigBird-Pegasus** (`google/bigbird-pegasus-large-pubmed`) - Clinical summarization - Long document processing - **Public** - No auth needed ### When HF_TOKEN Is Needed HF_TOKEN is **ONLY** required for: - Gated models (e.g., some Google MedGemma models) - Private organization models - Models with specific access restrictions **For this platform: HF_TOKEN is OPTIONAL** --- ## Architecture Design ### Robust Fallback System ``` 1. Try loading public model WITHOUT authentication ↓ 2. If model requires auth AND HF_TOKEN available → Use token ↓ 3. If model fails → Use alternative public model ↓ 4. If all AI models fail → Fallback to keyword analysis ``` ### Error Handling The system gracefully handles: - Missing HF_TOKEN (uses public models) - Network connectivity issues (cached models) - Model download failures (alternative models) - Authentication errors (informative logs) --- ## Deployment Configuration ### HuggingFace Spaces **No HF_TOKEN required in Space secrets** The platform will: 1. Check if HF_TOKEN exists 2. Log: "HF_TOKEN not configured - using public models" 3. Load all public models successfully 4. Provide full functionality ### Environment Variables **Optional:** ```bash HF_TOKEN=hf_xxx # Only for gated models ``` **Always Available:** ```bash TRANSFORMERS_CACHE=/app/.cache/huggingface HF_HOME=/app/.cache/huggingface PYTHONUNBUFFERED=1 TOKENIZERS_PARALLELISM=false ``` --- ## Code Implementation ### Model Loader (model_loader.py) ```python # Get HF token from environment (optional - most models are public) HF_TOKEN = os.getenv("HF_TOKEN", None) if HF_TOKEN: logger.info("HF_TOKEN found - will use for gated models if needed") else: logger.info("HF_TOKEN not found - using public models only (this is normal)") ``` ### Loading Strategy ```python def load_model(self, model_key: str): # Try without token first (works for public models) pipeline_kwargs = { "task": task, "model": model_id, "device": device, "trust_remote_code": True } # Only add token if it exists if HF_TOKEN: pipeline_kwargs["token"] = HF_TOKEN model = pipeline(**pipeline_kwargs) ``` ### Error Messages ```python if "401" in error or "unauthorized" in error: if not HF_TOKEN: logger.error("Model requires auth but HF_TOKEN not available") logger.error("Using public alternative") else: logger.error("Auth failed even with HF_TOKEN") ``` --- ## Testing Without HF_TOKEN ### Steps: 1. Deploy to HuggingFace Spaces **without adding HF_TOKEN secret** 2. Platform starts successfully 3. Logs show: "HF_TOKEN not configured - using public models" 4. Upload medical PDF 5. Bio_ClinicalBERT loads from public HuggingFace Hub 6. Analysis completes successfully 7. Results display AI classification ### Expected Logs: ``` INFO - HF_TOKEN not configured - using public models (Bio_ClinicalBERT, BioGPT, etc.) INFO - This is normal - most HuggingFace models are public INFO - Model Loader initialized on device: cuda INFO - Loading model: emilyalsentzer/Bio_ClinicalBERT for task: text-classification INFO - Successfully loaded model: emilyalsentzer/Bio_ClinicalBERT INFO - Document classified as: radiology (confidence: 0.89, method: ai_model) ``` --- ## Benefits of This Approach 1. **Reliability**: No dependency on external secrets 2. **Simplicity**: Works out-of-the-box without configuration 3. **Robustness**: Handles token expiration gracefully 4. **Transparency**: Clear logs about model availability 5. **Flexibility**: Can still use HF_TOKEN for gated models if needed --- ## Troubleshooting ### If Models Don't Load **Issue**: "Failed to load model" **Check:** 1. Is the model ID correct? 2. Is the model public on HuggingFace? 3. Does the model exist? (some may be renamed/moved) 4. Network connectivity to huggingface.co? **Solution:** - All models used are verified public - Platform will fallback to keyword analysis if models fail - Check logs for specific error messages ### If Authentication Errors Occur **Issue**: "401 Unauthorized" or "Authentication required" **This means:** - Model is gated/private (not expected for our models) - Model access changed to require auth **Solution:** 1. Replace with alternative public model 2. Add HF_TOKEN if model is critical 3. Use keyword fallback (already implemented) --- ## Verified Public Models All models have been verified as public on HuggingFace Hub: - ✅ Bio_ClinicalBERT - Public - ✅ BioGPT-Large - Public - ✅ biomedical-ner-all - Public - ✅ PubMedBERT - Public - ✅ SciBERT - Public - ✅ RoBERTa-SQuAD2 - Public - ✅ BigBird-Pegasus-PubMed - Public Last verified: 2025-10-28 --- ## Conclusion **The Medical AI Platform does NOT require HF_TOKEN for normal operation.** All core functionality works with public HuggingFace models. The platform is designed to be robust, reliable, and work without external authentication dependencies. --- **Status**: Production Ready **Authentication**: Optional **Public Models**: 7+ verified **Fallback System**: Implemented