def _incorporate_inv(self):
seq, cds_start, cds_stop, start, end = self._setup_incorporate()<EOL>seq[start:end] = list(reverse_complement('<STR_LIT>'.join(seq[start:end])))<EOL>is_frameshift = False<EOL>variant_start_aa = max(int(math.ceil((self._var_c.posedit.pos.start.base) / <NUM_LIT>)), <NUM_LIT:1>)<EOL>alt_data = AltTranscriptData(<EOL>seq,<EOL>cds_start,<EOL>cds_stop,<EOL>is_frameshift,<EOL>variant_start_aa,<EOL>self._transcript_data.protein_accession,<EOL>is_ambiguous=self._ref_has_multiple_stops)<EOL>return alt_data<EOL>
Incorporate inv into sequence