def _mirtop(out_files, hairpin, gff3, species, out):
args = argparse.Namespace()<EOL>args.hairpin = hairpin<EOL>args.sps = species<EOL>args.gtf = gff3<EOL>args.add_extra = True<EOL>args.files = out_files<EOL>args.format = "<STR_LIT>"<EOL>args.out_format = "<STR_LIT>"<EOL>args.out = out<EOL>reader(args)<EOL>
Convert miraligner to mirtop format